Project description
An integrated simulation approach will be developed and applied to model biochemical and biophysical properties of enzymes in aqueous and non-aqueous solvents: solubility and enzymatic function. We will tackle three major challenges: (i) Modelling of the thermodynamics of complex mixtures of substrates, products, additives, and solvents. (ii) Modelling of substrate binding to the enzyme, identification of bottlenecks and binding sites, and design of improved enzyme variants. (iii) Bridging the scale between microscopic (molecular) modelling and macroscopic kinetic models to interpret experimental data. The goal of the project is to establish a holistic modelling strategy, which enables the design of biocatalytic systems from first principles.
Project information
Project title | Data-integrated simulation of enzymes |
Project leaders | Jürgen Pleiss (Niels Hansen) |
Project duration | January 2019 - June 2021 |
Project number | PN 3-6 |
Publications PN 3-6
2022
- M. Gültig, J. P. Range, B. Schmitz, and J. Pleiss, “Integration of Simulated and Experimentally Determined Thermophysical Properties of Aqueous Mixtures by ThermoML,” Journal of Chemical & Engineering Data, vol. 67, no. 11, Art. no. 11, 2022, doi: 10.1021/acs.jced.2c00391.