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Seminars Graduate School SimTech: Winter Term 2008/09

Software and Hardware Systems for Simulation Technology

JP Dr. Dimka Karastoyanova and Prof. Dr. Thomas Ertl
Topics include:

Modelling of Simulation Workflows

Extended abilities for the SimTech runtime environment for simulation workflows

Visualization for integrated simulation systems

Interleaved Reconstruction and Interactive Visualization of large CT-Data on GPU Clusters

Visual Analytics for the Biosciences

Computing in the Many-Core Era

Time and place: Biweekly, Tuesday, 16:00-17:30, Universitätsstraße 38, Institute of Architecture of Application Systems (IAAS), room 2.013
First regular meeting: 16th December 2008
Proof of attendance: Vortrag
Further information: http://www.iaas.uni-stuttgart.de/lehre/vorlesung/2008_ws/seminar/
Dimka Karastoyanova
Participation is open to everybody.

Stochastic simulation in systems biology

Prof. Dr.-Ing. Frank Allgöwer
Topics include:

Chemical and biochemical kinetics in a stochastic framework

Stochastic simulation in biomechanics

Markov process descriptions of biological systems

Numerical methods to simulate stochastic models

Applications and case studies

Literature

D. J. Wilkinson: Stochastic Modelling in Systems Biology, Chapman & Hall/CRC (2006)

H. El-Samad, M. Khammash, L. Petzold, and D. Gillespie: Stochastic Modelling of Gene Regulatory Networks, Int. J. Robust Nonlinear Control (2002)

D. J. Higham: Modelling and Simulating Chemical Reactions, SIAM Review (2008)

Time and place: Weekly, Sunday, 14:00-15:30, V9, room 3.241
First regular meeting: 6th November 2008
Proof of attendance: Vortrag
Further information: http://www.ist.uni-stuttgart.de/education/courses/stochsimsysbio08/
Steffen Waldherr, waldherr@ist.uni-stuttgart.de, Pfaffenwaldring 9, room 3.233.
Participation is open to everybody.